Index

A

add_effector() (in module app.main.utils) add_enzyme() (in module app.main.routes_insert_data) add_enzyme_activation() (in module app.main.routes_insert_data) add_enzyme_effector() (in module app.main.routes_insert_data) add_enzyme_genes() (in module app.main.utils) add_enzyme_inhibition() (in module app.main.routes_insert_data) add_enzyme_misc_info() (in module app.main.routes_insert_data) add_enzyme_organism() (in module app.main.utils) add_enzyme_organism_subunits_only() (in module app.main.utils) add_enzyme_structures() (in module app.main.utils) add_gene() (in module app.main.routes_insert_data) add_gibbs_energy() (in module app.main.utils) add_mechanism_references() (in module app.main.utils)

add_metabolite() (in module app.main.routes_insert_data) add_metabolites_to_reaction() (in module app.main.utils) add_model() (in module app.main.routes_insert_data) add_model_assumption() (in module app.main.routes_insert_data) add_organism() (in module app.main.routes_insert_data) add_reaction() (in module app.main.routes_insert_data) add_references() (in module app.main.utils) app.load_data.import_grasp_model (module) app.main.routes_insert_data (module) app.main.routes_model_io (module) app.main.routes_modify_data (module) app.main.routes_see_data (module) app.main.routes_user (module) app.main.utils (module)

C

check_metabolite() (in module app.main.utils)

E

edit_profile() (in module app.main.routes_user)

explore() (in module app.main.routes_user)

F

follow() (in module app.main.routes_user)

G

get_model_activators() (in module app.load_data.import_grasp_model) get_model_effectors() (in module app.load_data.import_grasp_model) get_model_enzymes() (in module app.load_data.import_grasp_model) get_model_gibbs_energies() (in module app.load_data.import_grasp_model)

get_model_inhibitors() (in module app.load_data.import_grasp_model) get_model_mechanisms() (in module app.load_data.import_grasp_model) get_model_name() (in module app.load_data.import_grasp_model) get_model_stoichiometry() (in module app.load_data.import_grasp_model) get_model_subunits() (in module app.load_data.import_grasp_model)

I

index() (in module app.main.routes_user)

M

modify_enzyme() (in module app.main.routes_modify_data) modify_enzyme_activator() (in module app.main.routes_modify_data) modify_enzyme_effector() (in module app.main.routes_modify_data) modify_enzyme_inhibitor() (in module app.main.routes_modify_data) modify_enzyme_misc_info() (in module app.main.routes_modify_data) modify_enzyme_select_organism() (in module app.main.routes_modify_data) modify_metabolite() (in module app.main.routes_modify_data)

modify_model() (in module app.main.routes_modify_data) modify_model_assumption() (in module app.main.routes_modify_data) modify_organism() (in module app.main.routes_modify_data) modify_reaction() (in module app.main.routes_modify_data) modify_reaction_select_isoenzyme() (in module app.main.routes_modify_data) modify_reaction_select_model() (in module app.main.routes_modify_data) modify_reaction_select_organism() (in module app.main.routes_modify_data)

P

parse_coefficients() (app.utils.parsers.ReactionParser method)

parse_reaction() (app.utils.parsers.ReactionParser method)

R

ReactionParser (class in app.utils.parsers)

S

see_enzyme() (in module app.main.routes_see_data) see_enzyme_activator() (in module app.main.routes_see_data) see_enzyme_activators_list() (in module app.main.routes_see_data) see_enzyme_effector() (in module app.main.routes_see_data) see_enzyme_effectors_list() (in module app.main.routes_see_data) see_enzyme_inhibitor() (in module app.main.routes_see_data) see_enzyme_inhibitors_list() (in module app.main.routes_see_data) see_enzyme_list() (in module app.main.routes_see_data) see_enzyme_misc_info() (in module app.main.routes_see_data) see_enzyme_misc_info_list() (in module app.main.routes_see_data) see_gene_list() (in module app.main.routes_see_data)

see_mechanism_list() (in module app.main.routes_see_data) see_metabolite() (in module app.main.routes_see_data) see_metabolite_list() (in module app.main.routes_see_data) see_model() (in module app.main.routes_see_data) see_model_assumption() (in module app.main.routes_see_data) see_model_assumptions_list() (in module app.main.routes_see_data) see_model_list() (in module app.main.routes_see_data) see_organism() (in module app.main.routes_see_data) see_organism_list() (in module app.main.routes_see_data) see_reaction() (in module app.main.routes_see_data) see_reaction_list() (in module app.main.routes_see_data) set_binding_release_order() (in module app.main.utils)

U

unfollow() (in module app.main.routes_user)

upload_model() (in module app.main.routes_model_io) user() (in module app.main.routes_user)